FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1324790
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGGCG2400.001283159417.615929
GTTGAAT10551.2349976E-58.7308391
CCCGAAT9150.00210045077.7436191
CCCGTTC11302.59336E-47.524331
CAGAAAT22752.7159218E-55.60603951
GAGATTT15200.007838435.5633413
CAGATTC19050.00302379145.17882353
GTTTTCT21250.00201898535.00146681
Produced by FastQC (version 0.11.5)