FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1483613
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAAT2950.004160386514.7702671
CTTCGAC9402.2687844E-59.2706991
CTCAGAA8000.0043793758.1698041
CTCGAAA8350.0064347047.8273571
CCCGCCG19808.990259E-55.8683211
CAACGGA15700.0080405365.5506091
CTTTTGT25701.2675831E-45.0862591
Produced by FastQC (version 0.11.5)