FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences818012
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGGCC5800.003002319.9797493
CTCCAAA8608.8978355E-59.2720541
CTTTAAT10407.5820804E-58.3642991
CTTTTGG9300.00196703947.79468771
ATTTCCC10256.0619554E-47.7642566
Produced by FastQC (version 0.11.5)