FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences915756
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGTTC6050.00362856811.82125145
CACTGGC8256.9573754E-59.48350051
GACTTTA6800.00126181749.3700795
CGCCTAC6350.0075745948.9201743
TTCCACT9450.00290347.4916564
AATTTTG13100.00141413186.48514375
GGATGAT15300.00759929745.5785291
Produced by FastQC (version 0.11.5)