FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1150179
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACCAAA10709.4720646E-47.44700571
ACCAAAA11350.00184233096.9942562
GATGTAT12950.00737989376.1255715
CAACAAT14200.00270780556.121611
TATTTGC15450.0072721855.60113955
CTTCTGC23904.1862622E-55.45566131
CAAAAAA32152.2556014E-75.4075811
AAATCCA19450.0029319565.191454
GTTCCTG18200.0072719895.1742181
Produced by FastQC (version 0.11.5)