FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012534

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012534
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences757631
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTCCT5802.3321497E-411.2551511
CAAGCCG6400.0068926749.0229679
CTTAAAT9201.8405906E-48.6724471
CTTCAAG10508.4175656E-58.2895081
CTTTAAT14801.0368321E-57.35133741
TATTGCC9850.0035883257.3307177
CTTAAAA14556.5618835E-56.97913841
CTTCAAT10550.00669522166.8751841
CTTCTCC13350.00133046646.5198381
CTTCATT13600.00164059086.3999871
ATCAAAT15007.1696885E-46.286211
ATATTGC15259.2414295E-46.1553996
CATCATT13050.0075188346.11390921
TTCAATT15400.00103560816.0974572
CTTTTAT19504.674648E-45.57947641
CTTTATT20851.9173193E-45.56609631
CTTCTTT26908.399993E-65.39280271
TTTGATA17450.0045847945.38113642
CTTCATC17700.0051603245.32729671
TGATATT21500.00183094285.03773744
Produced by FastQC (version 0.11.5)