FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012535

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012535
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1005276
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGCTAG1255.6286674E-428.5665233
CGACAAT8558.620918E-610.0583631
GTTCTAT8256.406914E-59.5554451
CCCAAAT6200.0056359979.2472061
CAGGCAT12004.5369146E-47.1665841
AAAACTT16807.560492E-56.37645634
GAAAATT13700.0020942226.26323182
AGATTTT18400.0058678776.2615323145
ATTCTGT14250.00330253186.0137066
AAAATTT20352.6542355E-55.9659823
CAAGGAT16800.00321689765.54557131
Produced by FastQC (version 0.11.5)