FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences943209
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCGGT5400.001616682510.7518041
AATTTAG6607.9926633E-49.8493315
AGATTCC9700.00308163937.4462294
GTTAAAA9950.0037708867.29393771
CATCTAT11000.0099706426.5976981
Produced by FastQC (version 0.11.5)