FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012595

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012595
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences563214
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC1451.6437993E-410.000659120-124
CTCTTCG5900.00327347319.8750661
CCCAAAA6657.9286454E-49.85650351
CTTTGAA10256.0483664E-58.5262761
CTTCTCT7950.0040253748.2447481
CTTTGAT9500.00231328477.66616961
CAAAAAG13652.1598932E-46.9360581
TGGCCAG3303.578978E-46.127737530-34
Produced by FastQC (version 0.11.5)