FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012598

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012598
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1234246
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAACCC8509.291939E-59.2362384
GTTCGAA8500.00849147.58828351
CCTCAAA10750.00111570987.33337971
GGAACTT13000.0085655846.03810028
AAATCTC13150.0096269875.9701925
CAACAAA19300.00288214815.19865131
Produced by FastQC (version 0.11.5)