FastQCFastQC Report
Sun 5 Mar 2023
EGAF00005012608

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012608
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72916673
Sequences flagged as poor quality0
Sequence length30-100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGGTAGAGAGTCAACTCCTT6179060.8474138692531953No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGGTAGAGAGTCAACTCCT1038100.14236798763432337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)