FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012613

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012613
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences943361
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGATTG6100.004721629.4480013
TATTGTG8500.0081136697.62665847
CTTTTAT17407.046643E-45.81118971
GATATTC21304.6747424E-55.74883755
CTTCCAG17550.00491289245.3499841
CTTTTCT21200.001516655.11024431
Produced by FastQC (version 0.11.5)