FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012617

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012617
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences569104
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAACAC4604.797677E-412.427314
GTTACAG4700.00794393110.6406667
CAACAAC6900.00126354919.3674011
ACGTAGT1600.0050738478.037786590-94
CTGCTGT10050.0045977327.14594461
CTTTTGC12550.0055500796.2946951
Produced by FastQC (version 0.11.5)