FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences567522
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCGAAT4001.3730601E-414.4066962
CCCAATG5100.001041638911.3313591
CTTGGAA6404.8018184E-511.2870971
CCCTGCT6100.0046119719.473761
CTTTAAA8950.0013934538.0712191
AATCAAT10200.00501702547.08209941
CTTTCAT10550.0069589346.84714841
CTTTATT11950.00312972196.64946941
AAAGATA16102.6938794E-46.2615714
Produced by FastQC (version 0.11.5)