FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012641

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012641
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1340771
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCAT10600.0074404096.8014291
GTTCAAT12350.0045201546.421431
GTTGAAG12350.00475340856.3905386
TTGAGAT12650.0060978016.2394493
GGTTCAT13150.0086750316.0307721
Produced by FastQC (version 0.11.5)