FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1183854
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGATC3701.2653727E-57.9050627140-144
GTTTATT11454.6884382E-47.1463391
ACCCAAT7003.0784577E-86.5660415140-144
CTCAAAA12500.0091351536.0005421
CCAATAG7352.0169775E-55.4006405140-144
CAATAGG7809.511992E-65.35691140-144
CACCCAA8051.6475376E-55.1905465140-144
Produced by FastQC (version 0.11.5)