FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012667

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012667
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences891869
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCCAC3100.006387703613.8451289
CCCGTAT6003.482019E-410.7789221
TACGCTG7900.0044758488.1493469
CAACGAA9700.0033867927.3745535
GAATGAA10800.0096026026.6234415
CTGAAAG15300.00101954186.10570761
GTTCTTT17400.00471306645.3688121
Produced by FastQC (version 0.11.5)