FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences679827
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCTCAT4250.003187685712.0278691
CTTGAAG7401.5713138E-510.8552681
CTTTTAT12751.04059345E-58.0185791
CAAAGAT10658.254848E-47.5426271
CAAAAAA16300.00179326035.82418731
CTGTTTT15950.0089785575.4941451
TTTTATT19600.00324459355.1486392
Produced by FastQC (version 0.11.5)