FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012679

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012679
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences533963
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACTCT1650.003032749521.3934751
TGCACCC3357.1459386E-414.6676529
CAAATGT4300.00447713311.4927731
CGAGAAG6400.0082626378.8248081
TTCGATA3600.00156001115.45962675-79
Produced by FastQC (version 0.11.5)