FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012683

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012683
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1224822
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAGG4807.5317617E-411.7803851
CCCAAGT4400.00527422411.2449121
CCCAAGC6751.03134604E-410.4714531
CTCTAAA6550.0099060968.6329541
CAACAGG10308.1995275E-47.54859541
AACTATT10450.007916866.7577814
CTTCCAA14154.8443687E-46.49378061
CTTCAAT18557.463472E-66.47762351
CAAAGAC13650.00229020776.2138291
CTCTTTG14950.00631172025.6734961
ACGAGTG3500.0048096095.3609276100-104
AGATTTC17600.00661801275.2161624
Produced by FastQC (version 0.11.5)