FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012687

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012687
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences928766
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGTT6200.0061807089.1439091
CTTCAAT14601.6239937E-78.2514381
CATGAAT10307.9710386E-47.56813861
GTTTGAT10750.00125647567.25133281
CTCTTCT10550.00838760756.71708971
CTTTAAT11850.00350976646.5782131
TTTAATT16758.71485E-56.31095172
TCCAGTT12450.0062331976.2257987
CTTGAAA17157.465469E-45.7849221
CTTTCAT15450.0088112335.5041011
CTTTTTT35801.13981514E-75.14664131
Produced by FastQC (version 0.11.5)