FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012688

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012688
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1729255
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGAT11804.012409E-57.94904331
CCCACGC9500.00254138027.59503751
GTTAAAT20053.6149868E-76.83742761
CTAAAAT24903.6956772E-76.08518031
AAATGCG16250.00209115825.75103246
CCTCGAT15450.00723551775.60410551
GTTCTGT15650.0083375915.53248741
CTGATGG22501.0477107E-45.4515491
TCGATAT20050.0044069225.02483463
Produced by FastQC (version 0.11.5)