FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences942172
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAGCAT9252.3915505E-48.4657121
CGGAACC7850.0045157188.1414213
CTTCAAT14801.6383274E-67.6961011
CAAACTT10250.0060720266.9452621
CCAGCAT13150.00138696846.4963291
CTTTTAT18803.6763586E-45.67996841
Produced by FastQC (version 0.11.5)