FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences763603
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCTAG657.612287E-444.2811163
ACACGAT4000.002188122812.6470991
CTTAAAG4850.00921437410.4305971
AGCAATA9803.9212825E-48.0857862
GTTCATT8350.0067130217.78948831
CTTTTAT10950.00124007617.25991341
CAAAGAA12951.2445792E-47.2548171
CAGCAAT15300.0063689715.6681671
Produced by FastQC (version 0.11.5)