FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences996867
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTTAG2359.355164E-418.4646151
CCCCGCT5100.001032959611.34427451
CTCGAAA6759.708993E-49.64263251
CCTCGCT6450.00723794248.9698921
CCCGAAT6600.0087385648.766031
CTTCTAA8100.00508079728.0355271
CTTTGAA17100.00356197525.49799251
TCAAAAT22205.003667E-45.20360332
Produced by FastQC (version 0.11.5)