FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012707

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012707
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1132368
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT3552.9934472E-617.8718627
ACACGTC4202.498459E-413.4275378
CACGTCT4956.949222E-512.8171939
CAACAAT13705.106449E-67.72999141
AGAGCAC8250.00755266337.6882793
CCAGCGA9250.00242009557.63249641
CAAATAC12900.0089772546.0106345
CTGATAT13000.0097399825.96334463
CCGGAAT19607.215419E-45.4031061
Produced by FastQC (version 0.11.5)