FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences748716
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTTTAG1600.002153531422.6942941
CTCGAAT3900.001743789513.0346721
CGAATCT4550.005744142511.1158653
CCGAATC6350.0063801419.1082312
GAATCTT9800.00339327527.37276744
AAAAGGT9850.0035661857.33534243
TTCCAGC14400.00325688146.02069148
Produced by FastQC (version 0.11.5)