FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1958621
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTGTT18056.7018846E-87.52907661
CTCAGGA12250.00451297366.42276331
CTTAAAT17357.7049865E-45.77156931
CTTTGAA29906.481605E-85.74123531
CCAAAGG17000.00383466885.46448232
CTTTAAA30756.838036E-75.34992931
CTTTGAG17950.00718287945.18017241
CTTTAAT29057.458284E-65.1705711
Produced by FastQC (version 0.11.5)