FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012721

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012721
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences569584
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1609.1652146E-526.0334137
CACGTCT1951.2243947E-524.9208769
ACACGTC2457.1332695E-519.834988
GCACACG2950.00560464414.1198186
TTTCGCT4700.00982769510.3395129
AAACCGA5400.002336890410.2848064
CCCAGAT6150.0066076549.0687761
AGATATC6250.00780869238.8860724
GTCACTA1500.00367413468.33098520-24
AGTTTTT12000.00495430136.36372384
CTCCAGT3500.00756339875.157548415-19
CACTATT3500.00757115665.15709525-29
Produced by FastQC (version 0.11.5)