FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences523417
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC955.801616E-412.15302385-89
CATAAAT9600.00275530437.53047661
ATATTCC12657.632459E-46.84599836
GATATTC10850.0092051416.6514495
CGGACTC2650.0086985396.029698110-114
CTTTTTT21354.5621797E-55.7563171
Produced by FastQC (version 0.11.5)