FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012763

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012763
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences729583
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATTGGG4705.4579944E-412.2393135
AAAACTA7100.00160837469.1235954
AAATTTA12105.6423218E-57.73285444
ACAGGCT8600.00914130457.52504258
GCAGATT11250.00172509977.0370752
CTTCAAT10800.0081964756.7327161
AATTGAA12000.00343460176.591385
CAAAAAA19850.00340907975.12839651
Produced by FastQC (version 0.11.5)