FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences887723
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAT4750.009063479510.4541711
GTTCGAT8300.0075151657.69218251
CATTCAT9750.00386305947.27579741
CTGCAAC10100.0054447337.02366541
CTTTCAT16200.00235709455.6926381
CAATATT15300.0078226155.56384471
Produced by FastQC (version 0.11.5)