FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012773

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012773
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences768774
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTAGTA4000.002233281712.6127777
CTCGTTT4750.00781463310.6649861
CGAACTT5650.002411056810.2470161
CCAGCGT10256.042043E-47.7664881
TTTTGTG11250.00169953417.0471387
CTTTTAT12000.00321139236.6338751
Produced by FastQC (version 0.11.5)