FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences868001
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCGCT2900.00412319914.7892411
CCCTTAA4152.005653E-413.7795351
CCTCAAT6558.1986416E-49.8218631
CCCGTCA5900.00382372959.6923851
CTTAAAT10250.00583430666.9737891
CATTGAT13900.00247241846.17105051
CTTTATT20002.00374E-56.0759141
CATCCAT13000.0084087716.0484211
CTTCAAA16000.00185637355.8078591
CTTTCAA16450.00258273685.6489811
CTTTTAT22902.6142043E-55.618621
CTTTTGA15400.00772774365.56997441
CAAAAAG22005.068023E-45.19864231
GATATTC18350.0096758335.0486115
Produced by FastQC (version 0.11.5)