FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1551359
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACAATT9300.00229596537.67395832
CCACGAC11750.00283805566.7134931
CTCTGCT14957.9190946E-46.23585271
GTTCAAT13200.0095341045.97602561
CAAACAG22259.70548E-55.47914271
CACCACC23151.7614863E-45.2661311
CTTTAAA19150.0025949955.2426751
CGAAAGC23552.2755534E-45.1766851
CTTTTGG18100.00767627735.15060761
GTTTCAA19650.0035808845.1092741
Produced by FastQC (version 0.11.5)