FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences995872
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCTGAG5600.0029926899.9840096
TGCGTTT9102.446672E-48.4480089
CTTTTGG11553.7231596E-47.29111531
CTTCGGA9700.00408323447.23474071
CACATTT10800.00152943167.1182283
AAACTTC12100.0050080246.3582482
CGAAAAG13500.00219150386.2379541
Produced by FastQC (version 0.11.5)