FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012801

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012801
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1330448
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAA12509.019152E-68.1065541
ATTCGTT10450.0063818476.9101482
CATTAAT13702.4453228E-46.868171
CTAAAAT15800.0089413865.4972111
CTTTGAA21603.279865E-45.3614771
Produced by FastQC (version 0.11.5)