FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501346
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCCAG2950.00477122314.4661265
AGTATGC4000.002464567812.4468977
TTTTGTG6050.00489589679.4049757
GCTTGCC6250.0063721019.1085592
CTGAAAG9900.0041870417.2145781
ATATTGA10400.00703674936.83895446
Produced by FastQC (version 0.11.5)