FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences543453
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAAGT951.08492415E-437.811841
TAGTTTG2000.00850373117.899412
AGGATTG4300.004067556511.641495
CACAGAT6550.00865787558.7746561
CAAAGGA7450.00253057558.678961
CAATCTT8500.0086347387.57255554
Produced by FastQC (version 0.11.5)