FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences553955
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGTT2350.006419846318.792425140-144
TAAGGGT1850.00645938818.7735399
TCGATCT4900.001032822411.3427983
CAAGAAT7754.421283E-59.8823271
AAACAAC6350.0088442888.751926
CTTTTCT12200.00570772966.27770761
CAAAAAG15000.00117203486.03420931
CAAAAAT12850.0097724285.96015831
Produced by FastQC (version 0.11.5)