FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012845

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012845
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences411458
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGTACT1306.9492735E-427.5505037
TGCCTAG350.003917008620.47305385-89
GTGACTG1800.00460075219.907262
ATTACCC2705.692455E-419.874039145
TTCCCTG4200.003360648411.9414535
CGTACCA2250.0099803437.9496145145
Produced by FastQC (version 0.11.5)