Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005012848 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 856802 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTCAAT | 610 | 4.5154674E-4 | 10.479734 | 1 |
GCGATGT | 755 | 0.003267819 | 8.438412 | 3 |
GATATCC | 1435 | 9.462421E-6 | 7.3995357 | 5 |
TTCAGGA | 1185 | 0.003520807 | 6.57611 | 2 |
CATAAAT | 1235 | 0.005274001 | 6.326497 | 1 |
TATTGAA | 1255 | 0.0064564818 | 6.204604 | 7 |
CAAAAAC | 1620 | 0.0023214137 | 5.6998825 | 1 |