FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012857

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012857
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences412957
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACTTG2450.00128007317.618098
CTATTAC2900.003499114215.1559071
CTCAAGG3350.00910549213.1200381
CAACAAG6102.5448759E-512.0087791
CAATCAG4700.006591910510.9101031
CATGGAA5650.002528809510.186273
CTTCAAA7552.2194671E-49.7024561
Produced by FastQC (version 0.11.5)