FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences569229
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGAGTT1800.004511913819.9760552
CCCGTCT3000.004887053314.4144241
CTTCTGG8000.0046796728.1081131
GAATATA9350.00224607347.68928864
CGCTTCC8650.009625757.48104673
Produced by FastQC (version 0.11.5)