FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012869

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012869
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3483697
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAGCC2250.00167833297.05758190-94
CCCAAAT22302.114184E-66.17216061
CAAGTCT19901.6108354E-56.16459233
CCCAGAC18101.7359774E-46.00345371
CACGATT19655.2953203E-45.52989861
CACACGG20056.9436355E-45.41957661
CCCACGG20509.347568E-45.300611
GCATAGG20509.843422E-45.2801456
CCCAGTT24857.782366E-55.24728441
CCTCTAT27356.4922155E-55.0325111
Produced by FastQC (version 0.11.5)