FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012872

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012872
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1104977
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTGAT9703.6059908E-48.14981651
CAAAATT19005.747085E-56.05192141
CTTTAAT14250.00307762046.0519211
CTTCAAA18753.120732E-45.7493251
CTGAAAT15450.00755321565.58186861
CAGAAAT18550.00995787055.03647041
Produced by FastQC (version 0.11.5)