FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012890

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012890
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences398397
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGTCA300.001959924472.265383
CTCCAAG3100.005690749714.0858691
CAATCAT4400.00423320311.5781581
AGATATC4400.004462206311.4967654
CAAAGAT7452.0721962E-49.76872351
CTTTTCG6050.0040478899.6234041
CTTCTTC12700.0054597166.30351921
Produced by FastQC (version 0.11.5)