FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences662007
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAT4350.00403011811.656511
GTTCGAT5059.376253E-411.4751511
GGTGAAA10500.00647444376.89875171
TTCAATG10550.00704251746.83908132
CCTTGCC10700.00777088346.7698031
CTGCAAA13850.0020433586.276121
Produced by FastQC (version 0.11.5)