FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012895

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012895
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences849569
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCATGAC7550.00267726978.6263131
CTTTGAG9750.00318034067.42206951
CTCAAAA12707.755723E-46.83765461
CAAAGAT16605.3326934E-56.53902151
TTCAATG14050.0024880256.1675552
CTTTGAT15700.00834714255.5310961
CAAAGAA19856.1328843E-45.46840141
Produced by FastQC (version 0.11.5)