FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012899

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012899
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences548353
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTTAAGT3951.2958761E-414.5048727
ATTTAAG4500.005646792211.1405496
AGATACC4850.00982092210.3403634
TTTATTT15101.2405857E-46.64672853
AAAAAGG15150.00622197575.679432
Produced by FastQC (version 0.11.5)